Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
motAFlagellar basal body stator protein MotA. (256 aa)    
Predicted Functional Partners:
motB
Flagellar basal body stator protein MotB.
 
 0.999
flgK
Flagellar hook-associated protein FlgK.
 
  
 0.988
fliG
Flagellar motor switch protein FliG.
 
  
 0.986
fliP
Flagellar biogenesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.983
Geob_3116
Peptidoglycan-binding lipoprotein, OmpA family.
 
 
 0.983
fliQ
Flagellar biogenesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
  
 0.982
Geob_1411
Peptidoglycan-binding lipoprotein, OmpA family.
 
 
 0.982
fliF
Flagellar M-ring mounting plate protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.980
flgL
Flagellar hook-filament junction protein FlgL.
 
  
 0.979
fliN
Flagellar motor switch protein FliN.
 
  
 0.977
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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