Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Geob_0640PilZ domain protein. (268 aa)    
Predicted Functional Partners:
cheBR
Protein glutamate methylesterase CheB and methyltransferase CheR.
  
  
 0.787
motA
Flagellar basal body stator protein MotA.
  
 
 0.665
flgK
Flagellar hook-associated protein FlgK.
  
  
 0.643
fliM
Flagellar motor switch protein FliM.
  
 
 0.640
Geob_1306
Pentapeptide repeat protein.
 
  
 0.613
flgE
Flagellar hook protein FlgE.
  
  
 0.589
fliA
RNA polymerase sigma-28 factor for flagellar operon; Belongs to the sigma-70 factor family.
  
  
 0.586
Geob_2903
Membrane protein DUF318.
   
  
 0.577
fliC
Flagellin.
  
  
 0.571
cheV
Response receiver scaffold protein CheV; Domains: CheW, REC.
  
  
 0.569
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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