Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
flbTFlagellar biogenesis repressor FlbT. (129 aa)    
Predicted Functional Partners:
flaF
Flagellar biogenesis regulator FlaF.
 
  
 0.996
fliC
Flagellin.
 
  
 0.963
rsbW
Anti-sigma factor, protein serine/threonine kinase.
   
    0.904
Geob_1992
Cyclic diguanylate phosphodiesterase; Domains: EAL.
   
    0.753
Geob_0644
Hypothetical protein.
       0.731
flgJ
Flagellar rod-binding protein FlgJ.
 
  
 0.730
flgA
Flagellar basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
  
  
 0.722
flgH
Flagellar L-ring lipoprotein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.718
flgK
Flagellar hook-associated protein FlgK.
  
  
 0.718
flgI
Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.711
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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