Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Geob_0741Response receiver histidine kinase; Domains: REC, HisKA. (216 aa)    
Predicted Functional Partners:
Geob_0023
Response receiver histidine kinase; Domains: REC, HisKA, HATPase_c.
 
 0.881
Geob_1114
Sensor histidine kinase, PAS and GAF domain-containing; Domains: PAS, GAF, HisKA, HATPase_c.
 
 0.876
Geob_2828
Metal-dependent phosphohydrolase; Domains: HDc.
  
   0.870
Geob_0485
Sensor histidine kinase, PAS domain-containing; Domains: PAS, HisKA, HATPase_c.
 
   0.869
nuoBCD
NADH dehydrogenase I, B/C/D subunits; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
   0.864
Geob_2833
Sensor histidine kinase response receiver, HAMP domain-containing; Domains: HAMP, HisKA, HATPase_c, REC.
 
 0.860
fgrL
Domains: REC, PAS, GAF, HisKA, HATPase_c; possible homopolymeric tract sequence error.
 
 0.849
Geob_3566
Response receiver; Domains: REC.
 
 
0.847
Geob_3168
Sensor histidine kinase, HAMP domain-containing; Member of a two-component regulatory system.
 
   0.839
gnfK
Nitrogen fixation transcript antitermination sensor histidine kinase; Domains: HisKA, HATPase_c.
 
   0.837
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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