STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Geob_0803Sodium/anion symporter, putative. (480 aa)    
Predicted Functional Partners:
Geob_0802
Hypothetical protein.
       0.784
tusA
tRNA (5-carboxymethylaminomethyl-2-thiouridine34) synthesis sulfur carrier protein.
  
  
 0.757
apr
Adenosine-5'-phosphosulfate reductase, glutathione-dependent; Reduction of activated sulfate into sulfite.
  
  
 0.613
maeB-2
Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing.
  
  
 0.579
maeB-1
Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing.
  
  
 0.579
Geob_0800
Sulfite reductase subunit, putative.
     
 0.559
Geob_0847
Kef-type potassium transporter, NAD-binding protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
   
 0.523
fumB
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.494
cysN-1
Sulfate adenylyltransferase, subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.486
cysD-1
Sulfate adenylyltransferase, subunit 2.
  
  
 0.428
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.