Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cbcSMenaquinol oxidoreductase complex Cbc4, cytochrome c subunit, putative, 4 heme-binding sites. (157 aa)    
Predicted Functional Partners:
cbcU
Menaquinol oxidoreductase complex Cbc4, cytochrome b subunit, putative.
 
     0.957
cbcT
Menaquinol oxidoreductase complex Cbc4, iron-sulfur cluster-binding subunit, putative.
 
    0.905
Geob_2641
Cytochrome c, 8 heme-binding sites.
  
     0.768
Geob_1373
Cytochrome c, 27 heme-binding sites.
  
     0.764
Geob_0053
Cytochrome c, 26 heme-binding sites.
  
   
 0.757
Geob_1430
Cytochrome c, 8 heme-binding sites.
 
     0.757
Geob_1082
Ferritin-like domain protein.
  
     0.711
Geob_3348
ABC transporter, periplasmic substrate-binding lipoprotein.
  
     0.706
Geob_1429
Cytochrome c, 11 heme-binding sites.
 
     0.688
pulN
Type II secretion system protein PulN, putative.
  
     0.673
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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