Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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gene co-occurrence
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Score
Geob_1276Sensor histidine kinase, 7TMR-DISM_7TM domain-containing; Domains: 7TMR-DISM_7TM, HisKA, HATPase_c. (655 aa)    
Predicted Functional Partners:
Geob_1277
Helix-turn-helix transcriptional response regulator, LuxR family; Domains: REC, HTH_LuxR.
 
 
 
 0.940
cheY40H-3
Response receiver CheY associated with MCPs of class 40H.
  
 
 0.539
Geob_1844
Sensor histidine kinase response receiver, 4HB_MCP_1 and GAF domain-containing; Domains: 4HB_MCP_1, GAF, HisKA, HATPase_c, REC, REC, REC.
  
 
 0.493
Geob_0435
Response regulator, PilZ domain-containing; Domains: REC, PilZ.
 
 
 0.478
Geob_1306
Pentapeptide repeat protein.
 
   
 0.458
Geob_2600
Helix-turn-helix transcriptional regulator, LuxR family.
 
 
 
 0.448
nuoK-2
NADH dehydrogenase I, K subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.
       0.447
nuoL-2
NADH dehydrogenase I, L subunit.
       0.447
nuoM-2
NADH dehydrogenase I, M subunit.
       0.447
nuoN-2
NADH dehydrogenase I, N subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.
       0.447
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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