STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Geob_1328Hypothetical protein. (352 aa)    
Predicted Functional Partners:
Geob_1329
Protein of unknown function DUF2201, VWFA superfamily.
 
    0.958
Geob_2387
SPOR domain protein.
  
     0.709
Geob_1306
Pentapeptide repeat protein.
  
 
   0.611
Geob_3824
Ferritin-like domain protein.
  
     0.610
Geob_3022
Hypothetical protein.
 
     0.605
Geob_2379
Cytochrome c, 12 heme-binding sites.
  
     0.589
Geob_0490
Hypothetical protein.
 
     0.579
Geob_1330
Hypothetical protein.
       0.558
Geob_2909
Response receiver-related domain protein.
  
     0.527
Geob_0842
Outer membrane channel, OmpJ-related.
  
     0.526
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.