STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Geob_1526Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein. (139 aa)    
Predicted Functional Partners:
Geob_0792
Iron-sulfur cluster-binding oxidoreductase.
  
  
 0.848
ccdA-1
Cytochrome c biogenesis protein CcdA.
       0.790
resA
Apocytochrome c disulfide reductase lipoprotein ResA.
     
 0.760
Geob_1529
Sigma-54-dependent transcriptional response regulator; Domains: REC, sigma54 interaction, HTH8.
       0.737
nuoBCD
NADH dehydrogenase I, B/C/D subunits; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
  
 0.702
Geob_1530
Sensor histidine kinase; Domains: HisKA, HATPase_c.
  
  
 0.666
bamH-1
benzoyl-CoA reductase electron transfer protein, putative.
  
  
 0.600
etfA-2
Electron transfer flavoprotein, alpha subunit.
  
  
 0.580
etfA-3
Electron transfer flavoprotein, alpha subunit.
  
  
 0.580
Geob_3146
Flavin oxidoreductase, PfaD family, putative.
  
 
 0.567
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.