Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
Geob_1601Sensor histidine kinase, HAMP domain-containing, 2 heme-binding sites; Domains: HAMP, HisKA, HATPase_c. (542 aa)    
Predicted Functional Partners:
Geob_2920
Response regulator, GspIIEN domain-containing; Domains: GspIIEN, REC.
  
 
 
 0.712
usp-1
Universal stress protein Usp.
       0.689
cheY40H-2
Response receiver CheY associated with MCPs of class 40H.
  
 
 
 0.687
Geob_1533
Response regulator sensor, GAF domain-containing; Domains: REC, GAF.
 
 
 0.676
cheY40H-3
Response receiver CheY associated with MCPs of class 40H.
 
 
 
 0.663
Geob_3534
Response regulator, putative; Domains: REC.
  
 
   0.659
fdnI-1
Periplasmically oriented, membrane-bound formate dehydrogenase, cytochrome b subunit.
  
     0.656
Geob_3566
Response receiver; Domains: REC.
 
 
 0.656
Geob_0741
Response receiver histidine kinase; Domains: REC, HisKA.
  
 
   0.641
Geob_3083
Response regulator; Domains: REC.
  
 
 
 0.634
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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