Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Geob_1908acyl-CoA thioesterase. (148 aa)    
Predicted Functional Partners:
acpP-1
Acyl carrier protein.
 
 
 0.909
fabD-1
malonyl-CoA--acyl carrier protein transacylase.
 
  
 0.877
Geob_3146
Flavin oxidoreductase, PfaD family, putative.
  
 
 0.865
Geob_1909
Radical SAM domain iron-sulfur cluster-binding oxidoreductase with cobamide-binding-like domain.
  
    0.806
Geob_3147
Polyketide synthase.
  
 
 0.803
Geob_1904
Acyltransferase, putative.
 
     0.788
Geob_1906
Radical SAM domain iron-sulfur cluster-binding oxidoreductase with cobamide-binding-like domain.
  
    0.776
fabG-1
3-oxoacyl-(acyl carrier protein) reductase.
     
 0.764
Geob_3148
Polyketide synthase.
  
  
 0.710
Geob_0385
acyl-CoA thioesterase.
  
   
 0.656
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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