Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Geob_1964Anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase; Radical SAM domain iron-sulfur cluster-binding oxidoreductase with cobamide-binding-like domain, DUF4080-containing. (571 aa)    
Predicted Functional Partners:
Geob_1963
Zinc finger transcriptional regulator, TraR/DksA family.
  
    0.636
Geob_1965
Radical SAM domain iron-sulfur cluster-binding oxidoreductase.
  
    0.586
Geob_0128
Two-component system, NtrC family, response regulator AtoC; Domains: XylR, V4R, sigma54 interaction, HTH8.
  
  
 0.533
Geob_2441
Domains: XylR, V4R, sigma54 interaction, HTH8.
  
  
 0.533
Geob_2451
Domains: XylR, V4R, sigma54 interaction, HTH8.
  
  
 0.533
Geob_1962
Hypothetical protein.
       0.453
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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