Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
phoB-1Winged helix-turn-helix phosphate transcriptional response regulator; Domains: REC, trans_reg_C. (226 aa)    
Predicted Functional Partners:
phoR
Phosphate sensor histidine kinase, HAMP and PAS domain-containing; Domains: HAMP, PAS, HisKA, HATPase_c.
 0.989
Geob_0023
Response receiver histidine kinase; Domains: REC, HisKA, HATPase_c.
 0.985
Geob_3566
Response receiver; Domains: REC.
 
 
 0.940
phoB-2
Winged helix-turn-helix phosphate transcriptional response regulator; Domains: REC, trans_reg_C.
  
  
 
0.901
Geob_0485
Sensor histidine kinase, PAS domain-containing; Domains: PAS, HisKA, HATPase_c.
 
 0.894
nuoBCD
NADH dehydrogenase I, B/C/D subunits; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
   0.864
cheY40H-3
Response receiver CheY associated with MCPs of class 40H.
 
 
 0.851
Geob_3168
Sensor histidine kinase, HAMP domain-containing; Member of a two-component regulatory system.
 
 0.825
Geob_0408
Sensor histidine kinase, HAMP domain-containing; Domains: HAMP, HisKA, HATPase_c.
 
 0.822
Geob_2243
Sensor histidine kinase; Domains: HisKA, HATPase_c.
 
 
 0.808
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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