Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Geob_2019Protein kinase, ABC1 domain-containing, putative; Domains: ABC1. (484 aa)    
Predicted Functional Partners:
Geob_2018
Helix-turn-helix transcriptional regulator, TetR family.
 
     0.804
Geob_2020
Protein kinase, ABC1 domain-containing, putative; Domains: ABC1.
 
    
0.779
lolE-2
Lipoprotein release ABC transporter, membrane protein.
       0.776
lolD-2
Lipoprotein release ABC transporter, ATP-binding protein.
       0.774
Geob_0278
Ferritin-like protein of unknown function DUF2383.
   
 0.580
Geob_0651
SAM-dependent methyltransferase and glycosyltransferase, TPR domain-containing.
  
 
 0.536
Geob_2023
Hypothetical protein.
       0.480
Geob_0966
SAM-dependent methyltransferase, type 11; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway. Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
 
 
 
 0.470
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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