Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Geob_2069Oxidoreductase, SDR family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (269 aa)    
Predicted Functional Partners:
Geob_2070
SAM-dependent methyltransferase, type 11.
       0.625
Geob_3146
Flavin oxidoreductase, PfaD family, putative.
  
 
 0.598
Geob_0075
(acyl)-sn-glycerol-3-phosphate acyltransferase and acyl-(acyl carrier protein) ligase, major facilitator superfamily domain-containing.
   
 
 0.585
Geob_3147
Polyketide synthase.
  
 
 0.542
Geob_3236
Long-chain acyl-CoA synthetase; Acyl-(acyl carrier protein) ligase, acyl carrier, (acyl)-sn-glycerol-3-phosphate acyltransferase fusion protein.
  
  
 0.520
Geob_2030
Oxidoreductase, SDR family.
 
 
 
 0.491
Geob_2071
Iron-sulfur cluster-binding flavoprotein.
       0.481
Geob_2072
Iron-sulfur cluster-binding protein.
       0.442
Geob_3148
Polyketide synthase.
   
 
 0.426
Geob_2068
Helix-turn-helix transcriptional regulator, ArsR family.
       0.417
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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