STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apl-4Sodium/solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (659 aa)    
Predicted Functional Partners:
Geob_2329
Protein of unknown function DUF485.
 
  
 0.958
Geob_2331
Nucleotidyltransferase DUF294, putative.
 
  
 0.922
Geob_0174
Protein of unknown function DUF485.
 
  
 0.891
Geob_0156
Protein of unknown function DUF485.
 
  
 0.799
Geob_0194
Nucleotidyltransferase DUF294, putative.
 
    0.695
Geob_1670
Nucleotidyltransferase DUF294, putative.
 
    0.660
bamY
Benzoate--coenzyme A ligase.
  
  
 0.638
Geob_2328
Helix-turn-helix transcriptional regulator, IclR family.
  
    0.483
Geob_2332
Sensor histidine kinase, HAMP domain-containing; Domains: HAMP, HisKA, HATPase_c.
       0.428
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.