STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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Coexpression
Experiments
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[Homology]
Score
Geob_2539Nitrogenase vanadium-iron cofactor biosynthesis protein VnfE-related oxidoreductase subunit. (509 aa)    
Predicted Functional Partners:
nifK
Nitrogenase molybdenum-iron protein, beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.937
glnA
Glutamine synthetase, type I.
   
 
 0.916
nifH-2
Iron-sulfur cluster-binding ATPase, NifH/FrxC family; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.908
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.905
gdhA
Glutamate dehydrogenase, NADP-dependent; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.901
Geob_1764
Glu/Leu/Phe/Val dehydrogenase superfamily protein.
     
  0.900
Geob_3111
Cytochrome c nitrite reductase, 8 heme-binding sites; Belongs to the cytochrome c-552 family.
     
  0.900
Geob_2455
Iron-sulfur cluster-binding ATPase, NifH/FrxC family.
 
 
 0.894
Geob_2456
Nitrogen fixation protein NifB; Nitrogenase molybdenum-iron cofactor biosynthesis radical SAM domain iron-sulfur cluster-binding oxidoreductase.
 
  
 0.872
Geob_2540
Nitrogenase vanadium-iron cofactor biosynthesis protein VnfN-related oxidoreductase subunit.
 
   
0.872
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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