Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
vorC2-oxoacid:ferredoxin oxidoreductase, gamma subunit. (179 aa)    
Predicted Functional Partners:
vorB
2-oxoacid:ferredoxin oxidoreductase, thiamin-diphosphate-binding subunit.
 0.999
vorA
2-oxoacid:ferredoxin oxidoreductase, alpha subunit.
 
 0.998
korB
2-oxoglutarate:ferredoxin oxidoreductase, thiamin-diphosphate-binding subunit.
 0.997
korA
2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit.
 
 0.993
vorD
2-oxoacid:ferredoxin oxidoreductase, ferredoxin subunit.
 
 0.992
por
Pyruvate:ferredoxin/flavodoxin oxidoreductase.
  
 
 0.977
korD
2-oxoglutarate:ferredoxin oxidoreductase, ferredoxin subunit.
  
 0.954
icd
Isocitrate dehydrogenase, NADP-dependent; Belongs to the monomeric-type IDH family.
  
 
 0.922
korC
2-oxoglutarate:ferredoxin oxidoreductase, gamma subunit.
  
  
 
0.919
Geob_0840
(R)-methylmalonyl-CoA mutase, isobutyryl-CoA mutase-like catalytic subunit.
     
 0.907
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
Server load: low (12%) [HD]