Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Geob_31523-beta-hydroxysteroid dehydrogenase/isomerase family protein. (331 aa)    
Predicted Functional Partners:
Geob_3151
Amino acid adenylyltransferase.
 
 
 
 0.967
Geob_3150
Haloalkane dehalogenase, putative.
 
   
 0.954
fabH-3
3-oxoacyl-(acyl carrier protein) synthase III.
 
     0.891
Geob_3146
Flavin oxidoreductase, PfaD family, putative.
 
 
 0.872
Geob_3148
Polyketide synthase.
 
 
 0.869
Geob_3147
Polyketide synthase.
 
 
 0.862
acpS-2
Acyl carrier protein 4'-phosphopantetheinyltransferase; Belongs to the P-Pant transferase superfamily.
 
     0.823
rpsS
Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.676
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
  0.650
rpsQ
Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
  0.633
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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