Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Geob_3376Polyprenyl-phospho-glycoside--protein O-glycosyltransferase DUF2723 membrane protein, putative. (620 aa)    
Predicted Functional Partners:
Geob_3377
Membrane protein, putative.
 
     0.874
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
     
 0.799
ribF
Riboflavin kinase and FAD synthetase; Belongs to the ribF family.
     
 0.796
Geob_1479
Membrane protein, putative.
  
     0.770
tatC
Twin-arginine translocation pathway protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
 
   
 0.769
Geob_0490
Hypothetical protein.
  
     0.682
Geob_1306
Pentapeptide repeat protein.
  
    0.679
Geob_0622
Outer membrane surface lipoprotein.
  
     0.644
Geob_2387
SPOR domain protein.
  
    0.636
Geob_2170
Cytochrome c, 27 heme-binding sites.
  
     0.607
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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