STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hdrFHeterodisulfide oxidoreductase, NAD(P)H oxidoreductase subunit F. (281 aa)    
Predicted Functional Partners:
hdrE
Heterodisulfide oxidoreductase, iron-sulfur cluster-binding subunit E.
 
 0.993
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with NAD(+) as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.
 
 
 0.976
hdrB
Heterodisulfide oxidoreductase, CCG domain pair-containing subunit B.
 
 
 0.967
hyhB
Cytoplasmic [NiFe]-hydrogenase, iron-sulfur cluster-binding subunit.
  
 0.920
metC-1
Cystathionine gamma-synthase/beta-lyase.
     
 0.903
cysK-1
Cysteine synthase A.
     
  0.900
cysK-2
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
  0.900
cysK-3
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
  0.900
hdrG
Heterodisulfide oxidoreductase, iron-sulfur cluster-binding subunit G.
 
 
 0.882
pcmB
FAD-binding pyridine nucleotide-disulfide oxidoreductase.
 
 
 0.879
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.