STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_0010Pyrimidine 5'-nucleotidase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rca:Rcas_2986 pyrimidine 5'-nucleotidase. (221 aa)    
Predicted Functional Partners:
Haur_0009
PFAM: thioesterase superfamily protein; KEGG: rxy:Rxyl_2334 phenylacetic acid degradation-related protein.
       0.554
Haur_0008
PFAM: Appr-1-p processing domain protein; KEGG: sen:SACE_0151 phage tail assembly-like protein.
       0.547
Haur_0505
PFAM: aminoglycoside phosphotransferase; KEGG: kra:Krad_0938 aminoglycoside phosphotransferase.
  
     0.503
Haur_3428
PFAM: protein of unknown function DUF461; KEGG: rca:Rcas_0963 protein of unknown function DUF461.
  
     0.455
Haur_0011
Hypothetical protein.
       0.438
Haur_0316
PFAM: beta-lactamase domain protein; KEGG: rba:RB11859 PhnP protein homolog-putative hydrolase.
  
     0.422
Haur_1143
PFAM: PHA accumulation regulator DNA-binding protein; KEGG: rrs:RoseRS_2163 PHA accumulation regulator DNA-binding protein.
  
     0.416
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.