STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_0171KEGG: rrs:RoseRS_3127 hypothetical protein. (106 aa)    
Predicted Functional Partners:
Haur_0170
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mgr:MGG_02101 hypothetical protein.
       0.563
Haur_0169
KEGG: pfl:PFL_3331 ADP-ribose pyrophosphatase.
       0.545
Haur_0168
Hypothetical protein.
       0.445
Haur_0167
PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_00228 histone acetyltransferase HPA2/related acetyltransferase.
       0.414
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.