Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Haur_0185 | Haur_0187 | Haur_0185 | Haur_0187 | PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: rca:Rcas_2018 PilT protein domain protein. | Hypothetical protein. | 0.773 |
Haur_0185 | Haur_0188 | Haur_0185 | Haur_0188 | PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: rca:Rcas_2018 PilT protein domain protein. | KEGG: rca:Rcas_2221 hypothetical protein. | 0.543 |
Haur_0185 | Haur_0189 | Haur_0185 | Haur_0189 | PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: rca:Rcas_2018 PilT protein domain protein. | KEGG: rca:Rcas_2220 hypothetical protein. | 0.526 |
Haur_0185 | Haur_0190 | Haur_0185 | Haur_0190 | PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: rca:Rcas_2018 PilT protein domain protein. | Hypothetical protein; KEGG: rca:Rcas_2219 putative FHA domain containing protein. | 0.510 |
Haur_0185 | Haur_0191 | Haur_0185 | Haur_0191 | PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: rca:Rcas_2018 PilT protein domain protein. | KEGG: rca:Rcas_2218 hypothetical protein. | 0.510 |
Haur_0185 | Haur_0192 | Haur_0185 | Haur_0192 | PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: rca:Rcas_2018 PilT protein domain protein. | KEGG: rrs:RoseRS_2439 hypothetical protein. | 0.562 |
Haur_0185 | dtd | Haur_0185 | Haur_0186 | PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: rca:Rcas_2018 PilT protein domain protein. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.817 |
Haur_0185 | radA | Haur_0185 | Haur_0184 | PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: rca:Rcas_2018 PilT protein domain protein. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.848 |
Haur_0187 | Haur_0185 | Haur_0187 | Haur_0185 | Hypothetical protein. | PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: rca:Rcas_2018 PilT protein domain protein. | 0.773 |
Haur_0187 | Haur_0188 | Haur_0187 | Haur_0188 | Hypothetical protein. | KEGG: rca:Rcas_2221 hypothetical protein. | 0.543 |
Haur_0187 | Haur_0189 | Haur_0187 | Haur_0189 | Hypothetical protein. | KEGG: rca:Rcas_2220 hypothetical protein. | 0.526 |
Haur_0187 | Haur_0190 | Haur_0187 | Haur_0190 | Hypothetical protein. | Hypothetical protein; KEGG: rca:Rcas_2219 putative FHA domain containing protein. | 0.510 |
Haur_0187 | Haur_0191 | Haur_0187 | Haur_0191 | Hypothetical protein. | KEGG: rca:Rcas_2218 hypothetical protein. | 0.510 |
Haur_0187 | Haur_0192 | Haur_0187 | Haur_0192 | Hypothetical protein. | KEGG: rrs:RoseRS_2439 hypothetical protein. | 0.475 |
Haur_0187 | dtd | Haur_0187 | Haur_0186 | Hypothetical protein. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.773 |
Haur_0187 | radA | Haur_0187 | Haur_0184 | Hypothetical protein. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.661 |
Haur_0188 | Haur_0185 | Haur_0188 | Haur_0185 | KEGG: rca:Rcas_2221 hypothetical protein. | PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: rca:Rcas_2018 PilT protein domain protein. | 0.543 |
Haur_0188 | Haur_0187 | Haur_0188 | Haur_0187 | KEGG: rca:Rcas_2221 hypothetical protein. | Hypothetical protein. | 0.543 |
Haur_0188 | Haur_0189 | Haur_0188 | Haur_0189 | KEGG: rca:Rcas_2221 hypothetical protein. | KEGG: rca:Rcas_2220 hypothetical protein. | 0.952 |
Haur_0188 | Haur_0190 | Haur_0188 | Haur_0190 | KEGG: rca:Rcas_2221 hypothetical protein. | Hypothetical protein; KEGG: rca:Rcas_2219 putative FHA domain containing protein. | 0.922 |
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