STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_0366PFAM: protein of unknown function DUF322; KEGG: amt:Amet_2772 protein of unknown function DUF322. (158 aa)    
Predicted Functional Partners:
Haur_0365
PFAM: Dak phosphatase; KEGG: det:DET1263 DAK2 domain protein.
 
  
 0.970
Haur_0364
TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: rca:Rcas_0603 DegV family protein.
 
    0.843
Haur_0363
TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: rrs:RoseRS_3519 DegV family protein.
 
    0.769
Haur_0620
PFAM: DegV family protein; KEGG: deb:DehaBAV1_0262 DegV family protein.
 
    0.648
Haur_1698
PFAM: protein of unknown function DUF951; KEGG: rca:Rcas_1622 protein of unknown function DUF951.
  
     0.593
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
   
 0.548
Haur_2676
TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: rrs:RoseRS_3933 thiamine pyrophosphokinase.
 
     0.438
Haur_0750
PFAM: protein of unknown function DUF322; KEGG: dsy:DSY2365 hypothetical protein.
  
     0.430
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.