STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_0401KEGG: ypm:YP_1831 nucleoside-diphosphate-sugar epimerase. (402 aa)    
Predicted Functional Partners:
Haur_0400
Glycosyltransferase probably involved in cell wall biogenesis-like; KEGG: ypi:YpsIP31758_2102 hypothetical protein.
 
  
 
0.981
Haur_0301
PFAM: protein of unknown function DUF608; KEGG: aba:Acid345_1688 protein of unknown function DUF608.
  
 
  0.939
Haur_2520
PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: fjo:Fjoh_3378 glycoside hydrolase family 2, sugar binding; Belongs to the glycosyl hydrolase 2 family.
    
 0.903
Haur_0399
Hypothetical protein; KEGG: art:Arth_0442 alpha/beta hydrolase fold.
       0.773
Haur_0630
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: syn:slr0359 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
  
 0.569
Haur_0773
KEGG: gsu:GSU1489 hypothetical protein.
 
     0.534
Haur_0376
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gur:Gura_2007 3-beta hydroxysteroid dehydrogenase/isomerase.
 
    0.531
Haur_4699
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_0220 3-beta hydroxysteroid dehydrogenase/isomerase.
 
    0.517
Haur_1943
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_2811 tetratricopeptide TPR_2.
  
     0.516
Haur_4898
Hypothetical protein; KEGG: mcc:710488 similar to UPF0308 protein C9orf21.
  
     0.497
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.