STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_0493PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: kpn:KPN_01548 putative NADH:flavin oxidoreductase. (368 aa)    
Predicted Functional Partners:
Haur_3453
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sco:SCO7109 putative oxidoreductase.
    
 0.903
Haur_2309
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 
 
    0.813
Haur_0586
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cph:Cpha266_0765 NADH:flavin oxidoreductase/NADH oxidase.
  
     0.762
Haur_1835
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: rrs:RoseRS_2299 electron transfer flavoprotein beta-subunit.
  
 
 0.664
Haur_0494
KEGG: rca:Rcas_1638 hypothetical protein.
       0.495
Haur_1836
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: rrs:RoseRS_2298 electron transfer flavoprotein, alpha subunit.
   
 
 0.454
Haur_2951
Alcohol dehydrogenase zinc-binding domain protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mfa:Mfla_2206 alcohol dehydrogenase, zinc-binding.
 
  
 0.445
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.440
Haur_4913
TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: rrs:RoseRS_1187 translation elongation factor Tu.
   
    0.440
Haur_4394
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: rca:Rcas_1887 3-hydroxyacyl-CoA dehydrogenase NAD-binding.
  
  
 0.425
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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