STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_0562Hypothetical protein. (242 aa)    
Predicted Functional Partners:
Haur_0561
Hypothetical protein.
      0.804
Haur_0563
Hypothetical protein.
       0.773
Haur_0564
KEGG: aba:Acid345_4366 hypothetical protein.
       0.752
Haur_0565
PFAM: Terminase small subunit; KEGG: lca:LSEI_1935 phage terminase, small subunit.
       0.752
Haur_0559
Hypothetical protein.
       0.746
Haur_0560
KEGG: afu:AF2026 hypothetical protein.
       0.746
Haur_0558
Hypothetical protein.
       0.579
Haur_0556
Hypothetical protein.
       0.472
Haur_0557
Hypothetical protein.
       0.472
Haur_0553
Hypothetical protein.
       0.453
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.