STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_0599TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: ana:alr9029 putative death on curing protein. (132 aa)    
Predicted Functional Partners:
Haur_0600
TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: sth:STH876 death on curing protein.
 
    
0.818
Haur_0598
Hypothetical protein.
       0.773
Haur_0601
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bja:blr3042 putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.559
Haur_0602
Multi-sensor signal transduction histidine kinase; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rca:Rcas_0284 multi-sensor signal transduction histidine kinase.
       0.496
Haur_0597
TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: rrs:RoseRS_1454 glutamine amidotransferase of anthranilate synthase.
       0.468
Haur_0596
PFAM: UspA domain protein; KEGG: rca:Rcas_3007 UspA domain protein.
       0.433
Haur_0595
KEGG: rrs:RoseRS_2034 hypothetical protein.
       0.427
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.