STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_0712PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: sco:SCO7528 conserved hypothetical protein SC8G12.04. (148 aa)    
Predicted Functional Partners:
Haur_0514
KEGG: hch:HCH_06994 predicted ATPase/kinase involved in NAD metabolism.
   
    0.786
Haur_0713
PFAM: protein of unknown function UPF0074; Helix-turn-helix type 11 domain protein; KEGG: pol:Bpro_0147 helix-turn-helix, type 11.
 
     0.608
Haur_2929
PFAM: Phosphoglycerate mutase; KEGG: cmi:CMM_2041 hypothetical protein.
  
     0.480
Haur_1935
PFAM: peptidase S51 dipeptidase E; KEGG: sco:SCO0277 hypothetical protein.
 
     0.462
Haur_2209
PFAM: Domain of unknown function DUF1905; KEGG: sma:SAV637 hypothetical protein.
  
     0.461
Haur_0710
PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rca:Rcas_1579 two component transcriptional regulator, LuxR family.
  
    0.435
Haur_2214
KEGG: mxa:MXAN_2224 hypothetical protein.
 
  
 0.422
Haur_0711
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_0939 histidine kinase.
       0.411
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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