STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_0773KEGG: gsu:GSU1489 hypothetical protein. (455 aa)    
Predicted Functional Partners:
Haur_0400
Glycosyltransferase probably involved in cell wall biogenesis-like; KEGG: ypi:YpsIP31758_2102 hypothetical protein.
 
     0.583
Haur_0774
PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_0386 glycosyl transferase, family 2.
       0.578
Haur_3508
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_3789 tetratricopeptide TPR_2 repeat protein.
  
     0.557
Haur_0401
KEGG: ypm:YP_1831 nucleoside-diphosphate-sugar epimerase.
 
     0.534
Haur_1113
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_2811 tetratricopeptide TPR_2.
  
     0.491
Haur_1943
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_2811 tetratricopeptide TPR_2.
  
     0.475
Haur_0263
TIGRFAM: glutamate formiminotransferase; PFAM: Formiminotransferase-cyclodeaminase; Formiminotransferase domain protein; Formiminotransferase domain protein; KEGG: aba:Acid345_2130 formiminotransferase-like.
 
     0.454
Haur_2721
Conserved hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
  
     0.443
Haur_4898
Hypothetical protein; KEGG: mcc:710488 similar to UPF0308 protein C9orf21.
  
     0.442
Haur_4643
KEGG: rca:Rcas_4047 hypothetical protein.
  
     0.439
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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