STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_0869PFAM: protein of unknown function DUF1702; KEGG: stp:Strop_2700 protein of unknown function DUF1702. (317 aa)    
Predicted Functional Partners:
Haur_0868
PFAM: ASPIC/UnbV domain protein; KEGG: stp:Strop_2699 ASPIC/UnbV domain protein.
    
  0.977
Haur_0867
KEGG: stp:Strop_0597 hypothetical protein.
    
  0.973
Haur_0871
KEGG: stp:Strop_2698 hypothetical protein.
    
  0.907
Haur_0870
PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; KEGG: stp:Strop_2699 ASPIC/UnbV domain protein.
    
  0.903
Haur_0866
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: stp:Strop_2697 beta-ketoacyl synthase.
       0.738
Haur_0865
KEGG: stp:Strop_2696 hypothetical protein.
       0.737
Haur_0864
Hypothetical protein.
       0.702
Haur_0863
PFAM: peptidase M23B; KEGG: rrs:RoseRS_4626 peptidase M23B.
       0.450
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.