STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_0918KEGG: rsh:Rsph17029_3717 hypothetical protein. (272 aa)    
Predicted Functional Partners:
Haur_0919
KEGG: ape:APE_0492.1 hypothetical protein.
       0.773
Haur_0920
Hypothetical protein; KEGG: mka:MK1490 nitroreductase.
       0.773
Haur_0921
KEGG: mmw:Mmwyl1_0300 hypothetical protein.
       0.773
Haur_0922
PFAM: Lantibiotic dehydratase domain protein; KEGG: stp:Strop_2433 lantibiotic dehydratase domain protein.
       0.752
Haur_0923
Hypothetical protein.
       0.752
Haur_0916
Hypothetical protein.
       0.723
Haur_0917
PFAM: protein of unknown function DUF181; KEGG: pac:PPA0862 conserved protein DUF181.
       0.723
Haur_0924
Hypothetical protein; KEGG: bce:BC5083 lantibiotic biosynthesis protein.
       0.653
Haur_0925
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sru:SRU_0752 ABC transporter, ATP-binding protein.
       0.455
Haur_0915
Hypothetical protein.
       0.446
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.