STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_0930KEGG: rrs:RoseRS_0201 hypothetical protein. (268 aa)    
Predicted Functional Partners:
Haur_0931
KEGG: rrs:RoseRS_0200 hypothetical protein.
 
 
   0.888
Haur_0932
PFAM: Roadblock/LC7 family protein; KEGG: rca:Rcas_4340 roadblock/LC7 family protein.
 
     0.865
Haur_4547
KEGG: ppd:Ppro_2908 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
 
 0.835
Haur_3521
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bja:blr2985 two-component hybrid sensor and regulator.
  
 
 0.767
Haur_4225
KEGG: rca:Rcas_2725 hypothetical protein.
  
     0.760
Haur_3117
PFAM: protein of unknown function DUF95 transmembrane; KEGG: rrs:RoseRS_1285 protein of unknown function DUF95, transmembrane.
  
     0.757
Haur_0090
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_3987 tetratricopeptide TPR_2 repeat protein.
 
   
 0.755
Haur_2360
KEGG: rrs:RoseRS_3483 hypothetical protein.
  
     0.751
Haur_4114
KEGG: rca:Rcas_0805 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 0.734
Haur_4259
KEGG: rca:Rcas_2148 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 
 0.732
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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