Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Haur_0018 | Haur_0972 | PFAM: regulatory protein TetR; KEGG: gvi:glr1417 TetR family transcriptional regulatory protein. | Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: reu:Reut_C6095 regulatory protein, TetR. | 0.524 |
Haur_0972 | Haur_0018 | Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: reu:Reut_C6095 regulatory protein, TetR. | PFAM: regulatory protein TetR; KEGG: gvi:glr1417 TetR family transcriptional regulatory protein. | 0.524 |
Haur_0972 | Haur_0973 | Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: reu:Reut_C6095 regulatory protein, TetR. | PFAM: cytochrome P450; KEGG: bca:BCE_2696 cytochrome p450. | 0.675 |
Haur_0972 | Haur_0974 | Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: reu:Reut_C6095 regulatory protein, TetR. | PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: oih:OB0992 3-ketoacyl-(acyl-carrier-protein) reductase. | 0.547 |
Haur_0972 | Haur_2434 | Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: reu:Reut_C6095 regulatory protein, TetR. | PFAM: regulatory protein TetR; KEGG: rpe:RPE_3675 transcriptional regulator, TetR family. | 0.439 |
Haur_0972 | Haur_3161 | Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: reu:Reut_C6095 regulatory protein, TetR. | PFAM: regulatory protein TetR; KEGG: mxa:MXAN_4471 transcriptional regulator, TetR family. | 0.646 |
Haur_0973 | Haur_0972 | PFAM: cytochrome P450; KEGG: bca:BCE_2696 cytochrome p450. | Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: reu:Reut_C6095 regulatory protein, TetR. | 0.675 |
Haur_0973 | Haur_0974 | PFAM: cytochrome P450; KEGG: bca:BCE_2696 cytochrome p450. | PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: oih:OB0992 3-ketoacyl-(acyl-carrier-protein) reductase. | 0.641 |
Haur_0974 | Haur_0972 | PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: oih:OB0992 3-ketoacyl-(acyl-carrier-protein) reductase. | Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: reu:Reut_C6095 regulatory protein, TetR. | 0.547 |
Haur_0974 | Haur_0973 | PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: oih:OB0992 3-ketoacyl-(acyl-carrier-protein) reductase. | PFAM: cytochrome P450; KEGG: bca:BCE_2696 cytochrome p450. | 0.641 |
Haur_2434 | Haur_0972 | PFAM: regulatory protein TetR; KEGG: rpe:RPE_3675 transcriptional regulator, TetR family. | Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: reu:Reut_C6095 regulatory protein, TetR. | 0.439 |
Haur_3161 | Haur_0972 | PFAM: regulatory protein TetR; KEGG: mxa:MXAN_4471 transcriptional regulator, TetR family. | Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: reu:Reut_C6095 regulatory protein, TetR. | 0.646 |