STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1114Mandelate racemase/muconate lactonizing protein; Has epimerase activity with a variety of hydrophobic dipeptides (in vitro). Enzyme activity is highest with L-Phe-L-Tyr, but is still relatively low, suggesting that L-Phe-L-Tyr is not the physiological substrate; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (356 aa)    
Predicted Functional Partners:
Haur_1112
PFAM: NB-ARC domain protein; KEGG: gvi:glr2723 unknown protein.
       0.645
Haur_1113
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_2811 tetratricopeptide TPR_2.
       0.645
Haur_1115
KEGG: rrs:RoseRS_2800 hypothetical protein.
 
     0.534
Haur_1116
PFAM: von Willebrand factor type A; KEGG: rca:Rcas_2577 von Willebrand factor type A.
       0.419
Haur_1111
PFAM: CHAP domain containing protein.
       0.415
Haur_4772
PFAM: FAD linked oxidase domain protein; Cytokinin dehydrogenase 1 FAD and cytokinin binding; KEGG: mxa:MXAN_6144 putative oxygen-dependent FAD-linked oxidoreductase.
 
   
 0.413
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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