STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1244PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bad:BAD_1586 ABC transporter membrane component. (297 aa)    
Predicted Functional Partners:
Haur_1245
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bad:BAD_1587 sugar permeases.
 0.995
Haur_0777
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_0525 ABC transporter related.
 
 0.987
Haur_4035
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jan:Jann_1354 binding-protein-dependent transport systems inner membrane component.
 0.979
Haur_1243
PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_PB00115 putative sugar ABC transporter, substrate-binding protein.
 
 0.978
Haur_4034
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_2471 binding-protein-dependent transport systems inner membrane component.
  
  
 
0.923
Haur_3639
Monosaccharide-transporting ATPase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV7265 putative L-arabinose transport system permease protein.
 
 0.913
Haur_0300
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cth:Cthe_1018 binding-protein-dependent transport systems inner membrane component.
 
 0.909
Haur_1152
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_0230 binding-protein-dependent transport systems inner membrane component.
 
 0.907
Haur_1178
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: syn:slr0531 ABC-type glucosylglycerol transport system permease protein.
 
 0.899
Haur_4565
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_5379 putative sugar ABC transporter, permease protein.
 
 0.892
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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