STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1254PFAM: Cobyrinic acid ac-diamide synthase; KEGG: tel:tlr0963 probable cell division inhibitor minD. (250 aa)    
Predicted Functional Partners:
Haur_1255
KEGG: tel:tlr0963 probable cell division inhibitor minD.
 
    
0.710
Haur_1258
Putative sensor with HAMP domain; PFAM: histidine kinase HAMP region domain protein; KEGG: mhu:Mhun_2469 histidine kinase, HAMP region.
 
     0.705
Haur_1256
ATP/ADP translocase-like; KEGG: ppf:Pput_2512 major facilitator superfamily MFS_1.
 
     0.632
Haur_2004
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mca:MCA2813 4Fe-4S binding domain protein.
  
     0.572
Haur_1257
Hypothetical protein.
       0.563
Haur_1259
PFAM: alpha/beta hydrolase fold; KEGG: rca:Rcas_2065 cyclic nucleotide-binding protein.
       0.501
Haur_1059
KEGG: rca:Rcas_0648 cobaltochelatase, CobN subunit; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase.
     
  0.499
Haur_2070
KEGG: rrs:RoseRS_0558 cobaltochelatase, CobN subunit.
     
  0.499
Haur_1260
Hypothetical protein.
       0.478
Haur_1251
KEGG: sbl:Sbal_1818 hypothetical protein.
       0.470
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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