STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1365KEGG: sil:SPO1926 hypothetical protein. (925 aa)    
Predicted Functional Partners:
Haur_0618
PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: rrs:RoseRS_3600 fibronectin-binding A domain protein.
  
  
 0.841
Haur_3672
Conserved hypothetical protein; KEGG: gvi:gll3079 unknown protein.
 
  
 0.822
Haur_2885
PFAM: protein of unknown function DUF820; KEGG: rba:RB8456 hypothetical protein.
  
     0.586
Haur_0036
PFAM: protein of unknown function DUF820; KEGG: rba:RB8456 hypothetical protein.
  
     0.578
Haur_1281
PFAM: restriction modification system DNA specificity domain; KEGG: ecs:ECs5306 type I restriction-modification enzyme S subunit.
  
  
 0.502
Haur_2539
PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: cno:NT01CX_1301 helicase, SNF2/RAD54 family, putative.
 
    0.483
Haur_2908
KEGG: syf:Synpcc7942_1526 hypothetical protein.
  
     0.451
Haur_1282
PFAM: N-6 DNA methylase; KEGG: ana:alr3620 type I restriction modification enzyme M subunit.
 
    0.415
Haur_3299
PFAM: SCP-like extracellular; KEGG: cya:CYA_0610 SCP family protein.
  
     0.400
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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