STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1509PFAM: alpha/beta hydrolase fold; Thioesterase; KEGG: stp:Strop_3365 alpha/beta hydrolase fold. (261 aa)    
Predicted Functional Partners:
Haur_4368
PFAM: alpha/beta hydrolase fold; KEGG: nar:Saro_2613 alpha/beta hydrolase.
  
     0.747
Haur_3602
PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: mxa:MXAN_3278 hydrolase, alpha/beta fold family.
  
     0.744
Haur_4169
PFAM: alpha/beta hydrolase fold; KEGG: pcr:Pcryo_0751 alpha/beta hydrolase fold.
  
     0.725
Haur_1510
KEGG: sen:SACE_6399 protein of unknown function DUF899,thioredoxin-like.
       0.628
Haur_2008
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: rpc:RPC_3036 amino acid adenylation.
  
 
 0.552
Haur_3960
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: mxa:MXAN_4526 polyketide synthase type I.
  
 
 0.449
Haur_2085
PFAM: bifunctional deaminase-reductase domain protein; KEGG: stp:Strop_1085 bifunctional deaminase-reductase domain protein.
  
    0.448
Haur_1873
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: ana:alr2679 polyketide synthase.
  
 
 0.431
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.