STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1518KEGG: cbe:Cbei_2675 coagulation factor 5/8 type domain protein. (734 aa)    
Predicted Functional Partners:
Haur_2177
Glycoside hydrolase family 18; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 18; SMART: chitinase II; KEGG: hch:HCH_05453 chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.975
Haur_2512
Cellulose-binding family II; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 16; cellulose-binding family II; Fibronectin type III domain protein; KEGG: sco:SCO6596 secreted protein.
 
   
 0.972
Haur_2816
Glycoside hydrolase family 16; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 16; PT repeat-containing protein; KEGG: sma:SAV1800 secreted protein.
     0.969
Haur_2750
Chitinase; KEGG: sen:SACE_6558 chitinase II; PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; SMART: chitinase II; Belongs to the glycosyl hydrolase 18 family.
 
 
 
 0.752
Haur_4021
KEGG: sdn:Sden_2265 hypothetical protein.
  
     0.748
Haur_2175
Chitinase; PFAM: glycoside hydrolase family 19; Carbohydrate-binding family V/XII; KEGG: stp:Strop_4405 chitinase.
  
   
 0.723
Haur_2372
PFAM: cellulose-binding family II; KEGG: sco:SCO5786 secreted hydrolase.
  
   
 0.717
Haur_0859
PFAM: Ricin B lectin; KEGG: sma:SAV1044 hydrolase.
 
     0.693
Haur_0295
PFAM: glycoside hydrolase family 48; cellulose-binding family II; KEGG: sco:SCO6546 secreted cellulase.
  
   
 0.692
Haur_2136
PFAM: glycoside hydrolase family 6; cellulose-binding family II; KEGG: sde:Sde_2272 cellobiohydrolase A (1 4-beta-cellobiosidase A)-like; Belongs to the glycosyl hydrolase family 6.
  
   
 0.647
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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