STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1525PTS system, mannitol-specific IIC subunit; KEGG: gka:GK1948 PTS system, mannitol-permease II, BC component; TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system EIIC. (356 aa)    
Predicted Functional Partners:
Haur_1527
PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: cvi:CV_3052 phosphotransferase system.
 
 0.999
Haur_1526
PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: bay:RBAM_004230 MtlA.
 
     0.920
Haur_1524
KEGG: amt:Amet_4270 transcriptional antiterminator, BglG.
 
  
 0.910
Haur_4712
TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: dge:Dgeo_2173 phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family.
 
 
 0.904
Haur_1529
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: yen:YE0810 L-sorbose 1-phosphate reductase.
 
     0.892
Haur_1528
TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: psa:PST_0988 phosphotransferase system, fructose-specific EI/HPr/EIIA component; Belongs to the PEP-utilizing enzyme family.
  
 
 0.861
Haur_1530
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2150 glycosyl transferase, group 1.
       0.427
Haur_1531
PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: sru:SRU_2678 HD domain protein.
       0.427
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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