STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1659PFAM: GCN5-related N-acetyltransferase; KEGG: pau:PA14_10740 spermidine acetyltransferase. (294 aa)    
Predicted Functional Partners:
Haur_4198
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: bld:BLi02194 YobS.
  
     0.553
Haur_3480
KEGG: psa:PST_0666 hypothetical protein.
  
     0.510
Haur_1164
KEGG: dra:DR_2380 hypothetical protein.
  
     0.489
Haur_0781
PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BG12149 similar to antibiotic resistance protein.
  
    0.419
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.