STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1694PFAM: permease; KEGG: bsu:BG12016 hypothetical protein. (358 aa)    
Predicted Functional Partners:
Haur_1695
Membrane protein-like; KEGG: ava:Ava_3209 hypothetical protein.
 
  
 0.970
Haur_1696
Hypothetical protein.
       0.718
Haur_1081
PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: dge:Dgeo_2558 multicopper oxidase, type 3.
  
  
 0.527
Haur_1295
Nitrite reductase (NO-forming); PFAM: blue (type 1) copper domain protein; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: tfu:Tfu_2794 hypothetical protein.
  
  
 0.527
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
       0.486
Haur_0546
KEGG: tko:TK0773 predicted ATP-dependent endonuclease, OLD family.
   
    0.449
Haur_0681
KEGG: vha:VIBHAR_05008 hypothetical protein.
   
    0.449
Haur_1692
PFAM: AMP-dependent synthetase and ligase; KEGG: rca:Rcas_1775 AMP-dependent synthetase and ligase.
       0.441
Haur_1697
ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.412
Haur_1698
PFAM: protein of unknown function DUF951; KEGG: rca:Rcas_1622 protein of unknown function DUF951.
       0.412
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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