STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1760PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_1488 glycosyl transferase group 1. (428 aa)    
Predicted Functional Partners:
Haur_1761
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_1489 glycosyl transferase group 1.
 
     0.891
Haur_4880
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_0801 glycosyl transferase group 1.
  
     0.686
Haur_1759
KEGG: rrs:RoseRS_2129 hypothetical protein.
       0.682
Haur_4512
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2958 glycosyl transferase group 1.
  
     0.659
Haur_4279
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_2472 glycosyl transferase group 1.
  
     0.653
Haur_1120
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0780 glycosyl transferase, group 1.
  
     0.626
Haur_3735
PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4579 glycosyl transferase, group 1.
  
     0.618
Haur_3357
PFAM: glycosyl transferase group 1; KEGG: tma:TM0622 lipopolysaccharide biosynthesis protein, putative.
  
     0.611
Haur_1027
PFAM: glycosyl transferase group 1; KEGG: mca:MCA2126 glycosyl transferase, group 1 family protein.
  
     0.593
Haur_4489
PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_4294 glycosyl transferase group 1.
  
     0.586
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.