STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1786Hypothetical protein. (157 aa)    
Predicted Functional Partners:
Haur_1783
PFAM: GPW/gp25 family protein; KEGG: rci:RCIX1675 hypothetical protein.
       0.767
Haur_1784
KEGG: amt:Amet_4345 hypothetical protein.
       0.767
Haur_1785
KEGG: rci:RCIX1677 hypothetical protein.
       0.746
Haur_1787
Hypothetical protein.
       0.732
Haur_1782
PFAM: PAAR repeat-containing protein; KEGG: rci:RCIX1673 hypothetical protein.
       0.728
Haur_1788
KEGG: mag:amb1895 hypothetical protein.
       0.728
Haur_1779
Hypothetical protein; KEGG: tva:TVAG_307050 Repeated sequence found in lipoprotein LPP containing protein Pfam: Myosin_tail_1 PspA_IM30 V-ATPase_G DUF869 DUF593 DUF16 ATG16 KMP11 KAR9 Laminin_I Histone_HNS Mod_r Coagulase DegS DUF812 SF-assemblin DUF881 DUF1417 SurA_N MCPsignal AIP3 Lipoprotein_7 COG6 Apolipoprotein Prosystemin Cpn60_TCP1 FliD_C NPV_P10 DUF908 HalX DUF904 EzrA MbeB_N DUF1978 Filament DUF827 Spectrin Sec8_exocyst Prefoldin_2 Binary_toxA Syntaxin DUF1754 SH3BP5 TolA Tup_N CagA Baculo_PEP_C RmuC Laminin_II Reo_sigma1 Vps5 Erp_C FCH Hp0062 Syntaxin-6_N DUF148.
       0.721
Haur_1789
Hypothetical protein.
       0.721
Haur_1780
KEGG: rci:RCIX1667 hypothetical protein.
       0.720
Haur_1781
KEGG: rci:RCIX1671 hypothetical protein.
       0.720
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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