STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1855Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: Tetratricopeptide domain protein; KEGG: gvi:glr1376 hypothetical protein. (831 aa)    
Predicted Functional Partners:
Haur_3681
Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; Helix-turn-helix type 11 domain protein; KEGG: pol:Bpro_1406 transcriptional activator domain.
 
  
 0.676
Haur_1112
PFAM: NB-ARC domain protein; KEGG: gvi:glr2723 unknown protein.
  
   
 0.651
Haur_3683
PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_4424 transcriptional activator domain.
 
  
 0.586
Haur_4077
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mba:Mbar_A2597 hypothetical protein.
 
     0.586
Haur_4724
PFAM: transcriptional activator domain; KEGG: rrs:RoseRS_4327 transcriptional activator domain.
 
  
 0.568
Haur_4836
PFAM: regulatory protein TetR; KEGG: nfa:nfa44560 putative transcriptional regulator.
  
   
 0.522
Haur_0514
KEGG: hch:HCH_06994 predicted ATPase/kinase involved in NAD metabolism.
   
    0.471
Haur_1930
PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_3701 transcriptional regulator, SARP family.
 
  
0.469
Haur_0947
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rxy:Rxyl_2946 transcriptional regulator, LuxR family.
  
 
0.457
Haur_1113
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_2811 tetratricopeptide TPR_2.
  
     0.456
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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