STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_1897PFAM: extracellular solute-binding protein family 5; KEGG: tma:TM1746 putative oligopeptide transport system substrate-binding protein. (690 aa)    
Predicted Functional Partners:
Haur_1224
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: deb:DehaBAV1_0942 nickel-transporting ATPase.
 0.983
Haur_1225
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH130 oligopeptide ABC transporter permease protein.
 0.982
Haur_1226
KEGG: rrs:RoseRS_0418 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.975
Haur_3497
KEGG: rrs:RoseRS_0417 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.974
Haur_1227
KEGG: rca:Rcas_1064 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.971
Haur_1223
4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: deb:DehaBAV1_0943 extracellular solute-binding protein, family 5.
 
 
0.938
Haur_2247
PFAM: extracellular solute-binding protein family 5; KEGG: det:DET0573 oligopeptide-binding protein, putative.
  
  
 
0.929
Haur_1898
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM1747 putative oligopeptide transport system permease protein.
 
 0.910
Haur_1899
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM1748 putative oligopeptide transport system permease protein.
 
 0.898
Haur_1900
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: tma:TM1749 putative oligopeptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.851
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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