STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Haur_1908KEGG: mxa:MXAN_0347 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein. (487 aa)    
Predicted Functional Partners:
Haur_4547
KEGG: ppd:Ppro_2908 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.917
Haur_2161
Adenylate/guanylate cyclase with GAF sensor(s); PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; GAF domain protein; KEGG: rca:Rcas_3177 adenylate/guanylate cyclase with GAF and PAS/PAC sensors.
 
 
 0.899
Haur_0070
Multi-sensor signal transduction histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_2694 putative PAS/PAC sensor protein.
 
 
 
 0.867
Haur_1473
KEGG: rca:Rcas_3600 histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
0.857
Haur_1450
Diguanylate cyclase; KEGG: fal:FRAAL4022 putative two component sensor serine/threonine kinase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; protein kinase; GAF domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase.
   
 
 0.851
Haur_1909
PFAM: response regulator receiver; KEGG: mxa:MXAN_7150 response regulator.
 
 
 0.844
Haur_4240
KEGG: rrs:RoseRS_0204 integral membrane sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein.
 
 
0.832
Haur_0852
GAF sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0231 GAF sensor hybrid histidine kinase.
 
 
 
 0.827
Haur_0584
PFAM: response regulator receiver; KEGG: rca:Rcas_2286 response regulator receiver protein.
 
 
 0.825
Haur_3293
KEGG: ppd:Ppro_0716 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 0.825
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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