STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2214KEGG: mxa:MXAN_2224 hypothetical protein. (222 aa)    
Predicted Functional Partners:
Haur_2175
Chitinase; PFAM: glycoside hydrolase family 19; Carbohydrate-binding family V/XII; KEGG: stp:Strop_4405 chitinase.
  
     0.574
Haur_2193
PFAM: Carbohydrate-binding family V/XII; KEGG: fjo:Fjoh_4090 hypothetical protein.
  
    0.565
Haur_2213
PFAM: Cupin 2 conserved barrel domain protein; KEGG: sen:SACE_4576 cupin 2, conserved barrel.
       0.553
Haur_1140
PFAM: Rare lipoprotein A; KEGG: rrs:RoseRS_1550 rare lipoprotein A.
  
     0.500
Haur_1818
PFAM: coagulation factor 5/8 type domain protein; Carbohydrate-binding family V/XII; Rare lipoprotein A; KEGG: rca:Rcas_2307 rare lipoprotein A.
  
     0.488
Haur_1577
KEGG: fra:Francci3_3463 hypothetical protein.
  
     0.479
Haur_2217
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bca:BCE_3794 serine protease, subtilase family.
 
     0.475
Haur_2493
PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; Acetohydroxy acid isomeroreductase catalytic domain protein; KEGG: mxa:MXAN_2180 NADP oxidoreductase, coenzyme F420-dependent.
  
     0.463
Haur_0315
KEGG: mxa:MXAN_7122 putative lipoprotein.
  
     0.460
Haur_2215
Hypothetical protein.
       0.441
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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